Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCATCGTCTGGAACACCACCGCTTTCGCCAAGGATTTGCTTCCTAAATATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTATgtaatctaattattcttctctatcaattcctttcttttctctttttacatttttctgatttttcttaattttgcttgacttgtag

Basic information

species Glycine max
transcript GLYMA20G29610.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19053902|gb|BM732569.1|BM732569
EST:     ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTAT                         GGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT
genomic: ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTATgtaatctaat ... tgacttgtagGGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT
EST: gi|15337549|gb|BI498205.1|BI498205
EST:     ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTAT                         GGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT
genomic: ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTATgtaatctaat ... tgacttgtagGGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT
EST: gi|254327337|gb|GR836946.1|GR836946
EST:     ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTAT                         GGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT
genomic: ATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTATgtaatctaat ... tgacttgtagGGATTTAGAAAAGTTGTACCTGACCGCTGGGAGTTCTCGAACGAGTATTTT