1 5' 3' | 2 5' 3' | 3 5' 3' |
CGGCGGAAGACAAAGAAGTTTAAATAAATGGGTCTAGCTTTAATCGTCGGACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaaaactgtttctcatatacaccggtattttgcttttcatcgcacgtttcagcgttagggctcatggatctgatttttgttgcag
species | Glycine max |
transcript | GLYMA19G36750.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGT ATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCGEST: gi|193387761|gb|FK350532.1|FK350532
genomic: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaa ... tttgttgcagATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
EST: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGT ATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCGEST: gi|193358042|gb|FK319670.1|FK319670
genomic: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaa ... tttgttgcagATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
EST: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGT ATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCGEST: gi|193442973|gb|FK407865.1|FK407865
genomic: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaa ... tttgttgcagATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
EST: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGT ATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCGEST: gi|193329412|gb|FK296566.1|FK296566
genomic: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaa ... tttgttgcagATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
EST: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGT ATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
genomic: ACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaa ... tttgttgcagATAGGGGCCTTTTGAAGATTACGGAGGAAGAGTTTTCAGGGCCTCCATTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGCGGAAGACAAAGAAGTTTAAATAAATGGGTCTAGCTTTAATCGTCGGACTCCTCGGCCTTCTGATTCTATTTCACGCCGCTTATTCAACTATTCAGTgtaccctaaaaactgtttctcatatacaccggtattttgcttttcatcgcacgtttcagcgttagggctcatggatctgatttttgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC