Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|11274578|gb|BF324920.1|BF324920EST: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCC TGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
genomic: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCCtgtatgtatc ... tcatgatgcaGGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
EST:
gi|18848578|gb|BM567742.1|BM567742EST: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCC TGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
genomic: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCCtgtatgtatc ... tcatgatgcaGGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
EST:
gi|15200084|gb|BI424164.1|BI424164EST: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCC TGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
genomic: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCCtgtatgtatc ... tcatgatgcaGGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
EST:
gi|10710054|gb|BF009778.1|BF009778EST: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCC TGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
genomic: GCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCCtgtatgtatc ... tcatgatgcaGGTTGTTGTCCTAGAAGAACAGAAAAAGATGAATGTTGTGAAGGCTGAACA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCTCTCGCCTCCTCCTTCGCCGTTGGACTCCCGCCACCGTCGACGACGCCGCCGGAGCCGTCTCCGACGAGCCTCCCCGAAGAAAGTTCCGTTACACCCCtgtatgtatctctttctatgactttgcattttttttgtttacccttttgtttttttggagaaatatttaactgggattttgttttgtggtgaaaagtttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA