Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|47832176|gb|CK121860.1|CK121860EST: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAG GCTGCGGCTGCTGCTGCTAATG
genomic: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAGgtaagtgata ... gttaaaacagGCTGCGGCTGCTGCTGCTAATG
EST:
gi|86083970|gb|DR379729.1|DR379729EST: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAG GCTGCGGCTGCTGCTGCTAATGAGTGAAATGCAACCTGGAGTCAGAACAAT
genomic: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAGgtaagtgata ... gttaaaacagGCTGCGGCTGCTGCTGCTAATGAGTGAAATGCAACCTGGAGTCAGAACAAT
EST:
gi|164150102|gb|ES162138.1|ES162138EST: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAG GCTGCGGCTGCTGCTGCTAATGAGTGAAATGC
genomic: ACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAGgtaagtgata ... gttaaaacagGCTGCGGCTGCTGCTGCTAATGAGTGAAATGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCAAGGCTCAAGTCTGAGAAACCAGGTCTAACTCACACACAGTACAAGGACTTGATATGGAAGATGTGGAAGAAATCACCAGATAATCCTCTTAACCAGgtaagtgataatccatcttgcgtttgtagcaaataagtttgcagttaacacacctaaaggtctctggaagtagtaggcagaggtgttgattaatagggatggattattgttaaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA