Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116472167|gb|EG514759.1|EG514759EST: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAG GTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
genomic: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAGgtatgttgtt ... ctcaaacaagGTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
EST:
gi|19877941|gb|AU238772.1|AU238772EST: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAG GTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
genomic: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAGgtatgttgtt ... ctcaaacaagGTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
EST:
gi|116471558|gb|EG514150.1|EG514150EST: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAG GTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
genomic: CGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAGgtatgttgtt ... ctcaaacaagGTATATGGAGAAGACATGGCGGTTTTGGCAGGTGATGCACTCCTTGCATTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGCGCGGTTGAGATGATCCACACAAGCTCTCTTATTCATGACGATCTTCCGTGCATGGACAATGCCGACCTCCGCAGAGGCAAGCCCACCAACCACAAGgtatgttgttaaatcatataaaggctcaaagaaatgctcactagatttgaatcgttcattgattttagtaaatattcactcgtgttggaccaatttttgctcaaacaag
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