1 5' 3' | 2 5' 3' | 3 5' 3' |
gtacgcaagctacatttttgctagcggggaaggctcttgaaattcttcgtgcttctttgctttctggtggccatgaacgaacatacgcaactatcacagGAAGTTTTGGAGGGACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGCTATGGCGAGAGCGATCCATTCCCAGAGAGAAGCGTCAAGAGTGAAGCTC
species | Selaginella moellendorffii |
transcript | EFJ23250 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTGTGCATCCATTCTCGGGATCTCGGCACAGCTTGTTGCAAATCTCACAG GAAGTTTTGGAGGGACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGCEST: gi|169046101|gb|FE455558.1|FE455558
genomic: TTGTGCATCCATTCTCGGGATCTCGGCACAGCTTGTTGCAAATCTCACAGgtacgcaagc ... actatcacagGAAGTTTTGGAGGGACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGC
EST: TTGCAAATCTCACAG GANGTTTTGGAGGAACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGC
genomic: TTGCAAATCTCACAGgtacgcaagc ... actatcacagGAAGTTTTGGAGGGACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtacgcaagctacatttttgctagcggggaaggctcttgaaattcttcgtgcttctttgctttctggtggccatgaacgaacatacgcaactatcacagGAAGTTTTGGAGGGACTAAGTGTGTATATGGTAGCTTTCGACAGGGCTGGCTATGGCGAGAGCGATCCATTCCCAGAGAGAAGCGTCAAGAGTGAAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC