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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttgtcttgtgaaatcctctagtttgatctgatcctgttaaaatatttagctaaatggtttgggcttttggtactgaatgatttgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC

Basic information

species Oryza sativa
transcript LOC_Os04g30730.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os04g30730.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G043279_T02 (Zea mays), 3'ss of exon 3
ttgtcttgtgaaatcctctagtttgatctgatcc-tgttaaaatatttagctaaatggtttgggcttttggtactgaatgatttgcttta-ctattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAA-ATGTTTTAC--
  | | | ||||||    | |  |  |    |   || |      |||   |   |  |||   | |      |   |   |||||| |  || |  ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | || || |||||    || |   | | ||| |   |  
--gacatttgaaattgcatggcatatttctttgagtgattgctcttttgtgttggttttttaatcatagatggcctgacattttgctctgtctgtcctgcagCTCTCTCTGAAGACCGAGAGGGAAAAGAAGCGTGAGAAGTACTTCCCCATGAGGAAGTATGCTATCAAGGCCTAGGTC---AGAACTGTGAGATGCTGCGCTT

upper sequence: LOC_Os04g30730.1 (Oryza sativa), 3'ss of exon 3
lower sequence: AC206642.4_FGT001 (Zea mays), 3'ss of exon 3
-------ttgtcttgtgaaatcctctagtttgatctgat--cctgttaaaatatttagctaaatggtttgggcttttggtactgaatgatttgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC
        |||  |||| | |  | ||||| || || ||    | | ||  |||| | ||      | | || || |  |  | | ||| ||||  |  | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | || || ||| | | |   |  | |  | |  |  
tgcactactgtaatgtgtactt-tgtagtt-gaactaataatttatcaaggtattcatct-----ttcttggattgtcttgtttactgacttgc--tgatgttgtgcagCTCTCCTTGAAGACCGAGAGGGAAAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTACGCTATCAAGGCCTAGATCAGTGAAAGAACATTTATCCTGT

upper sequence: LOC_Os04g30730.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G010599_T02 (Zea mays), 3'ss of exon 3
-ttgtcttgtgaaatcctctagt--ttgatctgatcctgttaaaatatttagctaaatggtttgggcttttggtac-tgaatgatttgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC
   ||  | | |  |   |||||  ||||  | ||  | | ||  || | | |    |  || |  ||| | ||   |  |    | |  ||  | || | |||||||| |||||||| |||||||| |||||||||||||||||||| |||||| ||||||| ||| | || || ||| ||| |   |  | |  | || | |
gcagtagtataatgtgtactagtagttgaagtaata-tatcaagctactcatc---gttcttagatcttcttgtctgttgacttgtggtgtttgtgttcttcagCTCTCCTTGAAGACTGAGAGGGAAAAGAAGCGTGAGAAGTATTTTCCCATGCGGAAGTACGCTATCAAGGCCTAGATTAGTGAAAGAACAGCTTTTATCC

upper sequence: LOC_Os04g30730.1 (Oryza sativa), 3'ss of exon 3
lower sequence: Vv00s0317g00130.t01 (Vitis vinifera), 3'ss of exon 3
----ttgt-cttgtgaaatcctctagtttgatctgatcctgttaaaatatttagctaaatggtttgggcttttggtactgaatgatt--tgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC---
     ||| | |    |||  || |   || |   | || |||   |  ||||  |  || |||       |||||| | | |  |   |  |||  | ||   ||| | || || ||||| || ||||| |||||| | |||| ||| ||||||||||||||||||||| |||| |  |||||    |||| ||   ||||||  |   
gttactgtgccttcagaattttcca---tgcttgtagcccgtttctagcttta--tgtattgtt--attccttggtattaagtcttcactattttcttgttcctcagGTGTCATTAAAGACAGAAAGGGAAAAGAAGAGGGAGATGTACTTCCCCATGAGGAAGTATGCTATTAAGGTGTAGGTC---AGGATCAATTATGTTTGTCATT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88444567|gb|CI557868.1|CI557868
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86511524|gb|CI154157.1|CI154157
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|10930722|gb|AU160996.1|AU160996
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88489192|gb|CI426464.1|CI426464
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88459260|gb|CI516938.1|CI516938
EST:     GCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: GCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88487495|gb|CI424766.1|CI424766
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88438310|gb|CI541054.1|CI541054
EST:     CCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88551425|gb|CI481481.1|CI481481
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88555139|gb|CI485376.1|CI485376
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88490265|gb|CI427537.1|CI427537
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86258197|gb|CI064550.1|CI064550
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88980687|gb|CI022399.1|CI022399
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|12622556|gb|AU172769.1|AU172769
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88536300|gb|CI466044.1|CI466044
EST:     CCATCCGCAGGCGCCTCACCAAGCACCAG                         CTGTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88506864|gb|CI434370.1|CI434370
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88513969|gb|CI441475.1|CI441475
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88237157|gb|CI237006.1|CI237006
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88503580|gb|CI431086.1|CI431086
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88383126|gb|CI538154.1|CI538154
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88537507|gb|CI464458.1|CI464458
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88382232|gb|CI533436.1|CI533436
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88528391|gb|CI456550.1|CI456550
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88479415|gb|CI416686.1|CI416686
EST:     CCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88455265|gb|CI519286.1|CI519286
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCNCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88284686|gb|CI406132.1|CI406132
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88282353|gb|CI403749.1|CI403749
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88537441|gb|CI464389.1|CI464389
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86534034|gb|CI174240.1|CI174240
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88476822|gb|CI414093.1|CI414093
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88484839|gb|CI422110.1|CI422110
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88382032|gb|CI530838.1|CI530838
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88531061|gb|CI459500.1|CI459500
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88515161|gb|CI442815.1|CI442815
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88388835|gb|CI592723.1|CI592723
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88555153|gb|CI485392.1|CI485392
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88523190|gb|CI450994.1|CI450994
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88662857|gb|CI472493.1|CI472493
EST:     CCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88552179|gb|CI482309.1|CI482309
EST:     CGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88376190|gb|CI533092.1|CI533092
EST:     CGCCATCCCCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88507600|gb|CI435106.1|CI435106
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88319404|gb|CI515865.1|CI515865
EST:     GAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: GAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88544378|gb|CI473078.1|CI473078
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88512689|gb|CI440195.1|CI440195
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88319697|gb|CI520740.1|CI520740
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|163925689|gb|EG714525.1|EG714525
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAA
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAA
EST: gi|86822865|gb|CI251899.1|CI251899
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88379980|gb|CI513570.1|CI513570
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88478050|gb|CI415321.1|CI415321
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|426671|gb|D22738.1|D22738
EST:     ACCCGCGCCATCCGNAGGCGCCTCACNAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: ACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88502217|gb|CI429723.1|CI429723
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88463832|gb|CI527159.1|CI527159
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88437177|gb|CI526326.1|CI526326
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|55409034|gb|CV721410.1|CV721410
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|33810698|gb|CF331237.1|CF331237
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATT
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88213872|gb|CI213721.1|CI213721
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88534858|gb|CI463617.1|CI463617
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|5455571|gb|AU075819.1|AU075819
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88281498|gb|CI402894.1|CI402894
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88474479|gb|CI411750.1|CI411750
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88543432|gb|CI473439.1|CI473439
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|38469006|gb|CF953137.1|CF953137
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88533406|gb|CI460960.1|CI460960
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88429463|gb|CI557195.1|CI557195
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88452748|gb|CI560798.1|CI560798
EST:     AGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: AGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88514851|gb|CI442357.1|CI442357
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88409349|gb|CI559447.1|CI559447
EST:     CAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88374563|gb|CI516047.1|CI516047
EST:     CATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88244818|gb|CI242669.1|CI242669
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88509880|gb|CI437386.1|CI437386
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88533698|gb|CI461283.1|CI461283
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88517197|gb|CI444766.1|CI444766
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88366622|gb|CI556406.1|CI556406
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88444437|gb|CI557738.1|CI557738
EST:     AGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: AGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86532142|gb|CI172348.1|CI172348
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86423894|gb|CI062655.1|CI062655
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88284226|gb|CI405672.1|CI405672
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88480254|gb|CI417525.1|CI417525
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88290098|gb|CI547735.1|CI547735
EST:     CACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: CACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88281987|gb|CI403383.1|CI403383
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88539782|gb|CI469769.1|CI469769
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88277058|gb|CI397860.1|CI397860
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCTTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88449696|gb|CI539071.1|CI539071
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88238895|gb|CI236746.1|CI236746
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88476585|gb|CI413856.1|CI413856
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88481196|gb|CI418467.1|CI418467
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88278210|gb|CI399210.1|CI399210
EST:     TCCGCCCCAAGGAGACCCGCNCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCTTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|8527842|gb|AU092657.1|AU092657
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|87033199|gb|CI187823.1|CI187823
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88518285|gb|CI445939.1|CI445939
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88485704|gb|CI422975.1|CI422975
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88514754|gb|CI442260.1|CI442260
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86532257|gb|CI172463.1|CI172463
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88490993|gb|CI428265.1|CI428265
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88534794|gb|CI463544.1|CI463544
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|88554088|gb|CI484247.1|CI484247
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
EST: gi|86254374|gb|CI059101.1|CI059101
EST:     TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAG                         CTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG
genomic: TCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 54 (downstream exon)
Score: 29

GGCGGCGCTGAGGGAGGCGTACAAGAAGAAGAGCCTGCTCCCGCTCGACCTCCGCCCCAAGAAGACCCGCGCCATCCGCAGGCGCCTCACCAAGCACCAGgtatagaaac ... tattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttagctaaatggtttgggcttttggtactgaatgatttgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC
  agctaaa  putative branch site (score: 29)
                                       ctttact  putative PPT
                                        tttactatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttgtcttgtgaaatcctctagtttgatctgatcctgttaaaatatttagctaaatggtttgggcttttggtactgaatgatttgctttactattgtgcagCTCTCTTTGAAGACCGAGAGGGAGAAGAAGCGTGAGAAGTATTTCCCCATGAGGAAGTATGCTGTTAAAGCTTAGGTTATTAGGAACATAAATGTTTTAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
-tgtcttg
- - - - - - - - - - - -tgatctg
- - - - - - - - - - - - - - - - - - - - - - - -agctaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggtactg