1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...aagtagttggaaattatctcattcttttccatttgtatgcagatagatatattccacttaccatgttaactaaactttaatttccaaatgctttctgcagTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCATCTTTCGA
species | Glycine max |
transcript | GLYMA19G42100.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGAATGGACACATGATGAGGATCTATATGATCTTAGCTACTCTGAAATG TCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCAEST: gi|192333279|gb|FK026160.1|FK026160
genomic: ATGAATGGACACATGATGAGGATCTATATGATCTTAGCTACTCTGAAATGgtaatattca ... ctttctgcagTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCA
EST: ATGAATGGACACATGATGAGGATCTATATGACCTTAGCTACTCTGAAATG TCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCA
genomic: ATGAATGGACACATGATGAGGATCTATATGATCTTAGCTACTCTGAAATGgtaatattca ... ctttctgcagTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCA
gatatattccacttaccatgttaactaaactttaatttccaaatgctttctgcagTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCATCTTTCGA
tgctttct CT-rich tract
atgttaactaaacttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aagtagttggaaattatctcattcttttccatttgtatgcagatagatatattccacttaccatgttaactaaactttaatttccaaatgctttctgcagTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCATCTTTCGA
- - - - - - - - -ctcattc
- - - - - - - - - - - - - - - - - gtatgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccatgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aactaaac