1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagtgttttttgcttgcttttatcggtagagaattttggtgatggggtttgaattttgtttctttttgaatttggtagtttcagtgttaaaacattgtagatgattcaaagtttaacgattttgcagAATGATTTCTAGTCAATCAGGAGAGTTGTCGTTTATGCACATTTATAGTCAGAGGGCACAAGTTCCTGGTTCTATCATTATTGATG
species | Arabidopsis thaliana |
transcript | AT5G56180.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GACTCCATTTTCTTCGCTGAAACTAGTTTGCGTTCTGGTTATCCTCTCCG AATGATTTCTAGTCAATCAGGAGAGTTGTCGTTTATGCACATTTATAGTCA
genomic: GACTCCATTTTCTTCGCTGAAACTAGTTTGCGTTCTGGTTATCCTCTCCGgtgagtgttt ... gattttgcagAATGATTTCTAGTCAATCAGGAGAGTTGTCGTTTATGCACATTTATAGTCA
tggtagtttcagtgttaaaacattgtagatgattcaaagtttaacgattttgcagAATGATTTCTAGTCAATCAGGAGAGTTGTCGTTTATGCACATTTATAGTCAGAGGGCACAAGTTCCTGGTTCTATCATTATTGATG
gtttaac putative branch site (score: 3)
ttaaaacatt TA-rich tract