ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: Vv17s0000g10210, transcript: Vv17s0000g10210.t01
Orthologs: AT3G48470 GLYMA06G18140 GLYMA04G36800 LOC_Os02g38572 LOC_Os02g38680 PP1S260_5V6 SELMODRAFT_445763 GRMZM2G144166
CCAACTTCACTTTCATCACAgtatccttatttttcttctgctggaaattttctgggtttctatatacata ... ttcttttattccttttgattcattgtttattcttcacaagagtatctcagTTTCTTCTTCAAGCAGATTG

#2
gene: Vv17s0000g10210, transcript: Vv17s0000g10210.t01
Orthologs: AT3G48470 GLYMA06G18140 GLYMA04G36800 LOC_Os02g38572 LOC_Os02g38680 PP1S260_5V6 SELMODRAFT_445763 GRMZM2G144166
CCCAATAGAGCAGCAAACTTgtatccttcctctctccttccccccttgaatgaaatattcccttgagaga ... acatttcctttcttcccctggattccactgtgccttgacttaagatgcagATATAACCGCAGCTGTAGGG