ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: Vv00s0299g00030, transcript: Vv00s0299g00030.t01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S274_80V6  PP1S51_66V6  SELMODRAFT_81560  SELMODRAFT_88092  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
GGTTTCTTTGATTTGCCATTgtatccctttgttgttcctttagttgtcttcattagatgttttggcatat ... agatttctttatattagaagtctacattttccttaacagaagatgaacagATGTTACAGATGTTTGTATG



#2
gene: Vv00s0299g00030, transcript: Vv00s0299g00030.t01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S274_80V6  PP1S51_66V6  SELMODRAFT_81560  SELMODRAFT_88092  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
AACAGAACTTCAAGGGATTTgtatcctttcaatttcttaatttgttgttgctggggcttattgttaattt ... cgttttttattttcctagttggagtgtcaagcccttaacatttccaatagACAATCTTGAAGTAGAAGAG



#3
gene: Vv00s0299g00030, transcript: Vv00s0299g00030.t01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S274_80V6  PP1S51_66V6  SELMODRAFT_81560  SELMODRAFT_88092  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
TGGTTGCGAAACAAGCAATTgtatcctttgtccttttaagattttggatgcttttggtgatgatacatattctctgtaatgtagagtgttctttctttggttacttaacataggcacagTTTCTGTATTACTTGTTTGA