ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: SELMODRAFT_137588, transcript: EFJ05155
Orthologs: AT5G22220 AT2G36010 GLYMA10G09410 GLYMA02G35850 LOC_Os02g33430 LOC_Os12g06200 PP1S38_356V6 PP1S22_60V6 Vv08s0007g02510 Vv06s0080g01110 GRMZM2G041701 GRMZM2G052515
CGATATGTGGAGGACCGATCgtatccatccccttcgtttttatttcttttctcacgatcattcattgcttgcagcggcggtgatcttagaggatttttgttttccttaatgactagcagCTTCGACAGCTATGTGGGAC

#2
gene: SELMODRAFT_137588, transcript: EFJ05155
Orthologs: AT5G22220 AT2G36010 GLYMA10G09410 GLYMA02G35850 LOC_Os02g33430 LOC_Os12g06200 PP1S38_356V6 PP1S22_60V6 Vv08s0007g02510 Vv06s0080g01110 GRMZM2G041701 GRMZM2G052515
GAAGATGAAAACAATAAACAgtatccttttttatcagttatctttcccgcacccctcagaatttccttgacttcatacttctaccgaagATGGTTGTACGTGACCGAGG