ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: PP1S74_221V6, transcript: PP1S74_221V6.1
Orthologs: AT1G11890  GLYMA16G01330  GLYMA07G04740  LOC_Os01g13350  LOC_Os03g57760  LOC_Os06g09850  Vv09s0002g00780  GRMZM2G120596  GRMZM2G011636  
ACTGGACCTTACTTTTTCCAgtatcctttcgcccgcgtgtgtggacatggtgtcgtttctactttcgtcg ... ggtaattttctactggtgtgttcgagaatcgccttaaatgaagattccagTTACATCATAGAAGGGGGTG



#2
gene: PP1S74_221V6, transcript: PP1S74_221V6.2
Orthologs: AT1G11890  GLYMA16G01330  GLYMA07G04740  LOC_Os01g13350  LOC_Os03g57760  LOC_Os06g09850  Vv09s0002g00780  GRMZM2G120596  GRMZM2G011636  
ACTGGACCTTACTTTTTCCAgtatcctttcgcccgcgtgtgtggacatggtgtcgtttctactttcgtcg ... ggtaattttctactggtgtgttcgagaatcgccttaaatgaagattccagTTACATCATAGAAGGGGGTG



#3
gene: PP1S74_221V6, transcript: PP1S74_221V6.3
Orthologs: AT1G11890  GLYMA16G01330  GLYMA07G04740  LOC_Os01g13350  LOC_Os03g57760  LOC_Os06g09850  Vv09s0002g00780  GRMZM2G120596  GRMZM2G011636  
ACTGGACCTTACTTTTTCCAgtatcctttcgcccgcgtgtgtggacatggtgtcgtttctactttcgtcg ... ggtaattttctactggtgtgttcgagaatcgccttaaatgaagattccagTTACATCATAGAAGGGGGTG