ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: PP1S72_124V6, transcript: PP1S72_124V6.1
Orthologs: AT1G76940  GLYMA20G30540  GLYMA16G28620  GLYMA10G37100  GLYMA10G37090  GLYMA06G13690  GLYMA06G05690  GLYMA04G41150  GLYMA04G05680  GLYMA02G09230  LOC_Os06g05530  LOC_Os06g03690  LOC_Os08g43360  LOC_Os09g35830  LOC_Os09g35850  SELMODRAFT_59352  SELMODRAFT_69289  Vv16s0098g01370  Vv18s0166g00240  Vv04s0008g01390  GRMZM2G051247  GRMZM2G061277  
CTCCCGCAGAGAAGCTGCACgtatcctcctcttgcagtgcgtggtcctttgcattgcgcataaaatgtgg ... agtggtttcggtccctgttatatgtgcggtttcttcactctccagcacagATATTTTCCGCCCATTTATT



#2
gene: PP1S72_124V6, transcript: PP1S72_124V6.2
Orthologs: AT1G76940  GLYMA20G30540  GLYMA16G28620  GLYMA10G37100  GLYMA10G37090  GLYMA06G13690  GLYMA06G05690  GLYMA04G41150  GLYMA04G05680  GLYMA02G09230  LOC_Os06g05530  LOC_Os06g03690  LOC_Os08g43360  LOC_Os09g35830  LOC_Os09g35850  SELMODRAFT_59352  SELMODRAFT_69289  Vv16s0098g01370  Vv18s0166g00240  Vv04s0008g01390  GRMZM2G051247  GRMZM2G061277  
CTCCCGCAGAGAAGCTGCACgtatcctcctcttgcagtgcgtggtcctttgcattgcgcataaaatgtgg ... agtggtttcggtccctgttatatgtgcggtttcttcactctccagcacagATATTTTCCGCCCATTTATT