ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: PP1S234_26V6, transcript: PP1S234_26V6.1
Orthologs: AT4G12790 GLYMA08G39880 LOC_Os03g21914 LOC_Os03g50620 Vv00s0174g00200 GRMZM2G131324
GGTCTTGTGTACTGCATGGAgtatcctttcttggtattcttaatcttattgaaaatctgttaagctgtcg ... gtaaaatgtgtgaggaggaatcgagatgtagctctttaaccttgtggcagATATCTAGAAGATAATCTCG

#2
gene: PP1S234_26V6, transcript: PP1S234_26V6.2
Orthologs: AT4G12790 GLYMA08G39880 LOC_Os03g21914 LOC_Os03g50620 Vv00s0174g00200 GRMZM2G131324
GGTCTTGTGTACTGCATGGAgtatcctttcttggtattcttaatcttattgaaaatctgttaagctgtcg ... gtaaaatgtgtgaggaggaatcgagatgtagctctttaaccttgtggcagATATCTAGAAGATAATCTCG

#3
gene: PP1S234_26V6, transcript: PP1S234_26V6.3
Orthologs: AT4G12790 GLYMA08G39880 LOC_Os03g21914 LOC_Os03g50620 Vv00s0174g00200 GRMZM2G131324
GGTCTTGTGTACTGCATGGAgtatcctttcttggtattcttaatcttattgaaaatctgttaagctgtcg ... gtaaaatgtgtgaggaggaatcgagatgtagctctttaaccttgtggcagATATCTAGAAGATAATCTCG