ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: PP1S21_417V6, transcript: PP1S21_417V6.1
Orthologs: AT5G25270  AT5G42220  AT5G11080  GLYMA17G38130  GLYMA17G11440  GLYMA14G39850  LOC_Os07g31540  LOC_Os08g19830  Vv09s0054g01880  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G020660  GRMZM2G062354  
CCAGTTGTTATCCGCCTACAgtatccttgtttactagtcaaaagtgtagcagcttcgtcaaatttttagt ... tggggtgttctgtacagtacaacagtattttccctaattcaaatttgcagATGTTGAGGATGGACATACG



#2
gene: PP1S21_417V6, transcript: PP1S21_417V6.2
Orthologs: AT5G25270  AT5G42220  AT5G11080  GLYMA17G38130  GLYMA17G11440  GLYMA14G39850  LOC_Os07g31540  LOC_Os08g19830  Vv09s0054g01880  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G020660  GRMZM2G062354  
CCAGTTGTTATCCGCCTACAgtatccttgtttactagtcaaaagtgtagcagcttcgtcaaatttttagt ... tggggtgttctgtacagtacaacagtattttccctaattcaaatttgcagATGTTGAGGATGGACATACG



#3
gene: PP1S21_417V6, transcript: PP1S21_417V6.3
Orthologs: AT5G25270  AT5G42220  AT5G11080  GLYMA17G38130  GLYMA17G11440  GLYMA14G39850  LOC_Os07g31540  LOC_Os08g19830  Vv09s0054g01880  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G020660  GRMZM2G062354  
CCAGTTGTTATCCGCCTACAgtatccttgtttactagtcaaaagtgtagcagcttcgtcaaatttttagt ... tggggtgttctgtacagtacaacagtattttccctaattcaaatttgcagATGTTGAGGATGGACATACG



#4
gene: PP1S21_417V6, transcript: PP1S21_417V6.4
Orthologs: AT5G25270  AT5G42220  AT5G11080  GLYMA17G38130  GLYMA17G11440  GLYMA14G39850  LOC_Os07g31540  LOC_Os08g19830  Vv09s0054g01880  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G020660  GRMZM2G062354  
CCAGTTGTTATCCGCCTACAgtatccttgtttactagtcaaaagtgtagcagcttcgtcaaatttttagt ... tggggtgttctgtacagtacaacagtattttccctaattcaaatttgcagATGTTGAGGATGGACATACG