ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


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#1
gene: PP1S177_17V6, transcript: PP1S177_17V6.1
Orthologs: AT5G65180  AT5G10060  AT3G26990  GLYMA19G26780  GLYMA16G05720  GLYMA11G36110  GLYMA08G14790  LOC_Os01g70060  LOC_Os04g54420  LOC_Os11g03570  LOC_Os12g03340  Vv08s0056g00770  Vv17s0000g00860  Vv07s0031g01240  Vv14s0068g01560  GRMZM2G138496  GRMZM5G886765  GRMZM2G174938  GRMZM2G138659  GRMZM2G064107  GRMZM2G147226  
TTCGCAACAAAGCATTGAAAgtatccctgcacgttcattaaagtcgcatagtctttactttgaattccgt ... ctcatttccttgtgaagtgcattacgcttggaaaccttcactcgcttcagCTCTCTCCCATTGGTGCATA



#2
gene: PP1S177_17V6, transcript: PP1S177_17V6.2
Orthologs: AT5G65180  AT5G10060  AT3G26990  GLYMA19G26780  GLYMA16G05720  GLYMA11G36110  GLYMA08G14790  LOC_Os01g70060  LOC_Os04g54420  LOC_Os11g03570  LOC_Os12g03340  Vv08s0056g00770  Vv17s0000g00860  Vv07s0031g01240  Vv14s0068g01560  GRMZM2G138496  GRMZM5G886765  GRMZM2G174938  GRMZM2G138659  GRMZM2G064107  GRMZM2G147226  
TTCGCAACAAAGCATTGAAAgtatccctgcacgttcattaaagtcgcatagtctttactttgaattccgt ... ctcatttccttgtgaagtgcattacgcttggaaaccttcactcgcttcagCTCTCTCCCATTGGTGCATA