ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: PP1S174_72V6, transcript: PP1S174_72V6.1
Orthologs: GLYMA08G21840 GLYMA07G02180 LOC_Os01g55590 GRMZM2G460078
TCATTGCCTACCCTTGCATCatatcctctagaccgtgaatcttgcgcattcaaagttcaaccgctgatat ... acagtctttagcagctattatgattctccttgacttcaaatagagttcacATGTGCATGGGGTTTTCAAT

#2
gene: PP1S174_72V6, transcript: PP1S174_72V6.2
Orthologs: GLYMA08G21840 GLYMA07G02180 LOC_Os01g55590 GRMZM2G460078
TCATTGCCTACCCTTGCATCatatcctctagaccgtgaatcttgcgcattcaaagttcaaccgctgatat ... acagtctttagcagctattatgattctccttgacttcaaatagagttcacATGTGCATGGGGTTTTCAAT

#3
gene: PP1S174_72V6, transcript: PP1S174_72V6.3
Orthologs: GLYMA08G21840 GLYMA07G02180 LOC_Os01g55590 GRMZM2G460078
TCATTGCCTACCCTTGCATCatatcctctagaccgtgaatcttgcgcattcaaagttcaaccgctgatat ... acagtctttagcagctattatgattctccttgacttcaaatagagttcacATGTGCATGGGGTTTTCAAT