ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os09g36300, transcript: LOC_Os09g36300.1
Orthologs: AT5G47040 GLYMA17G16150 GLYMA05G05820 GLYMA01G41150 PP1S29_103V6 Vv02s0012g00310 GRMZM2G109560 GRMZM2G017961
AATAAAACGTTCAACGATCAgtatcctttcaaattattcagataatgaacagcattttctgattaattgg ... tatgatctatattatcatacatttagaattccttaacatgttttcaccagCTATTTGAATGTTCCATTTG

#2
gene: LOC_Os09g36300, transcript: LOC_Os09g36300.2
Orthologs: AT5G47040 GLYMA17G16150 GLYMA05G05820 GLYMA01G41150 PP1S29_103V6 Vv02s0012g00310 GRMZM2G109560 GRMZM2G017961
AATAAAACGTTCAACGATCAgtatcctttcaaattattcagataatgaacagcattttctgattaattgg ... tatgatctatattatcatacatttagaattccttaacatgttttcaccagCTATTTGAATGTTCCATTTG

#3
gene: LOC_Os09g36300, transcript: LOC_Os09g36300.3
Orthologs: AT5G47040 GLYMA17G16150 GLYMA05G05820 GLYMA01G41150 PP1S29_103V6 Vv02s0012g00310 GRMZM2G109560 GRMZM2G017961
AATAAAACGTTCAACGATCAgtatcctttcaaattattcagataatgaacagcattttctgattaattgg ... tatgatctatattatcatacatttagaattccttaacatgttttcaccagCTATTTGAATGTTCCATTTG

#4
gene: LOC_Os09g36300, transcript: LOC_Os09g36300.4
Orthologs: AT5G47040 GLYMA17G16150 GLYMA05G05820 GLYMA01G41150 PP1S29_103V6 Vv02s0012g00310 GRMZM2G109560 GRMZM2G017961
AATAAAACGTTCAACGATCAgtatcctttcaaattattcagataatgaacagcattttctgattaattgg ... tatgatctatattatcatacatttagaattccttaacatgttttcaccagCTATTTGAATGTTCCATTTG