ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: LOC_Os09g11450, transcript: LOC_Os09g11450.2
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  PP1S158_27V6  SELMODRAFT_144857  SELMODRAFT_163708  Vv15s0024g00280  GRMZM2G067747  
TTGGATTTATCTCTGCTCTTatatccttttcctaagttctacatggaaactctgtttgcaaaacatgaaa ... attattttatttactacttgatcttgtgcaaccttgaccactctgtgtacCTGTTTAAGTATGCTGGACT



#2
gene: LOC_Os09g11450, transcript: LOC_Os09g11450.2
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  PP1S158_27V6  SELMODRAFT_144857  SELMODRAFT_163708  Vv15s0024g00280  GRMZM2G067747  
GCTTCATATTCTTCTCAATTgtatccttaattttgtttttcattttcctaaatcgccagttttggccttttctctgtttggtagaaaattggttccttgacttactgaacaacacagATATTTATAATCATTGCAAG



#3
gene: LOC_Os09g11450, transcript: LOC_Os09g11450.2
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  PP1S158_27V6  SELMODRAFT_144857  SELMODRAFT_163708  Vv15s0024g00280  GRMZM2G067747  
TTATTGCCTCCAATAATATTatatccttttgattttcaaattcaaacttaatttcttatactgttctaaaagatgcttcataatatctgaatacgttttccttgacttcatagaacCCAATCAGGATTCAGTCTAT