ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os08g40140, transcript: LOC_Os08g40140.1
Orthologs: AT5G12210  AT3G12070  GLYMA08G11710  GLYMA05G28630  PP1S34_430V6  PP1S163_87V6  SELMODRAFT_145221  SELMODRAFT_269919  Vv12s0134g00150  Vv15s0024g00080  GRMZM2G124557  
TGTCGATAAGGTTGCTGATTgtatccttcactactagatcttgagtgaggttcatcatgcttgtgcaaac ... tcctcagcttgagatctggttccctttttttcctatttaaatcatgtcagACATTGCTGGGCTTCAAAAT



#2
gene: LOC_Os08g40140, transcript: LOC_Os08g40140.2
Orthologs: AT5G12210  AT3G12070  GLYMA08G11710  GLYMA05G28630  PP1S34_430V6  PP1S163_87V6  SELMODRAFT_145221  SELMODRAFT_269919  Vv12s0134g00150  Vv15s0024g00080  GRMZM2G124557  
TGTCGATAAGGTTGCTGATTgtatccttcactactagatcttgagtgaggttcatcatgcttgtgcaaac ... tcctcagcttgagatctggttccctttttttcctatttaaatcatgtcagACATTGCTGGGCTTCAAAAT