ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os08g19830, transcript: LOC_Os08g19830.1
Orthologs: AT5G25270  AT5G11080  GLYMA17G11440  PP1S21_417V6  PP1S183_12V6  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G062354  
TGAACTCCTCTCTGCGTATCgtatcctcatctatttttggcttgtagcattttagttgttttgtcttcca ... gtacttggcttaccttgtaaatggtaatccttaactgaagtttttattagACGTGGAAGATGGCCATACA



#2
gene: LOC_Os08g19830, transcript: LOC_Os08g19830.3
Orthologs: AT5G25270  AT5G11080  GLYMA17G11440  PP1S21_417V6  PP1S183_12V6  Vv04s0008g06230  Vv11s0118g00660  GRMZM2G062354  
TGAACTCCTCTCTGCGTATCgtatcctcatctatttttggcttgtagcattttagttgttttgtcttcca ... gtacttggcttaccttgtaaatggtaatccttaactgaagtttttattagACGTGGAAGATGGCCATACA