ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os07g47530, transcript: LOC_Os07g47530.1
Orthologs: AT1G02890  AT4G02480  AT1G62130  GLYMA10G02410  GLYMA10G02400  GLYMA06G17940  GLYMA02G17410  GLYMA02G17400  Vv17s0000g01550  Vv07s0005g00200  GRMZM2G157621  
CACTTGGGAGACATGCTTATgtatcctttcatcaccaactacccttgcataagtgttgcttgtactggca ... gttcagaaaagtattaatgttgtatatgaagctccttaacatgttcgcagATATTTCAGCAACTTCCAGA



#2
gene: LOC_Os07g47530, transcript: LOC_Os07g47530.2
Orthologs: AT1G02890  AT4G02480  AT1G62130  GLYMA10G02410  GLYMA10G02400  GLYMA06G17940  GLYMA02G17410  GLYMA02G17400  Vv17s0000g01550  Vv07s0005g00200  GRMZM2G157621  
CACTTGGGAGACATGCTTATgtatcctttcatcaccaactacccttgcataagtgttgcttgtactggca ... gttcagaaaagtattaatgttgtatatgaagctccttaacatgttcgcagATATTTCAGCAACTTCCAGA