ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os03g58480, transcript: LOC_Os03g58480.1
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  Vv05s0020g04880  Vv14s0081g00480  GRMZM2G121176  GRMZM2G163912  
TCCTGCTCTGTGACTTCTTCgtatccttcttctatctaataaaaatacaccgtgtttctattttttttgg ... aaactattgtatacaatttggcccctttttttttcctgagctgtgtaaagAACCACAACTTCAACAAGAG



#2
gene: LOC_Os03g58480, transcript: LOC_Os03g58480.2
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  Vv05s0020g04880  Vv14s0081g00480  GRMZM2G121176  GRMZM2G163912  
TCCTGCTCTGTGACTTCTTCgtatccttcttctatctaataaaaatacaccgtgtttctattttttttgg ... aaactattgtatacaatttggcccctttttttttcctgagctgtgtaaagAACCACAACTTCAACAAGAG