ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os03g52700, transcript: LOC_Os03g52700.1
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
GGCCTCCTTGATCTGCCACTgtatcctcttcagaagtttattctgctttaggctgataatatggctcatg ... atatatatgctacatttgttcccatggtttcaccttgacatttataccagATACCACAGATGTTTGTTTG



#2
gene: LOC_Os03g52700, transcript: LOC_Os03g52700.1
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
TGATTGCAAAGCAAGCGATTgtatcctttggccctgctatctaataatgaacaaaaatattttcatggttcctcacaaacatgttatttcctccgtatgtccttgacatttttatagTTCTTGTATTATCTATTTGA