ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os03g50620, transcript: LOC_Os03g50620.1
Orthologs: AT4G12790 GLYMA08G39880 PP1S234_26V6 Vv00s0174g00200 GRMZM2G131324
GGGCTTATCTATTGCATGGAgtatcctgttttaacattgagtcttttaattttatttcccttttctttcc ... attatttaataggattttatgctgtcagttgttccttaagaaaaccatagGCACCTTGAAGACAATTTGG

#2
gene: LOC_Os03g50620, transcript: LOC_Os03g50620.2
Orthologs: AT4G12790 GLYMA08G39880 PP1S234_26V6 Vv00s0174g00200 GRMZM2G131324
GGGCTTATCTATTGCATGGAgtatcctgttttaacattgagtcttttaattttatttcccttttctttcc ... attatttaataggattttatgctgtcagttgttccttaagaaaaccatagGCACCTTGAAGACAATTTGG