ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.1
Orthologs: AT3G57410 AT2G41740 GLYMA10G21350 GLYMA03G29280 PP1S299_6V6 SELMODRAFT_177604 SELMODRAFT_235997 Vv08s0007g08690 GRMZM2G081322
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA

#2
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.2
Orthologs: AT3G57410 AT2G41740 GLYMA10G21350 GLYMA03G29280 PP1S299_6V6 SELMODRAFT_177604 SELMODRAFT_235997 Vv08s0007g08690 GRMZM2G081322
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA

#3
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.3
Orthologs: AT3G57410 AT2G41740 GLYMA10G21350 GLYMA03G29280 PP1S299_6V6 SELMODRAFT_177604 SELMODRAFT_235997 Vv08s0007g08690 GRMZM2G081322
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA