ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.1
Orthologs: AT3G57410  AT2G41740  GLYMA10G21350  GLYMA03G29280  PP1S299_6V6  SELMODRAFT_177604  SELMODRAFT_235997  Vv08s0007g08690  GRMZM2G081322  
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA



#2
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.2
Orthologs: AT3G57410  AT2G41740  GLYMA10G21350  GLYMA03G29280  PP1S299_6V6  SELMODRAFT_177604  SELMODRAFT_235997  Vv08s0007g08690  GRMZM2G081322  
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA



#3
gene: LOC_Os03g24220, transcript: LOC_Os03g24220.3
Orthologs: AT3G57410  AT2G41740  GLYMA10G21350  GLYMA03G29280  PP1S299_6V6  SELMODRAFT_177604  SELMODRAFT_235997  Vv08s0007g08690  GRMZM2G081322  
CAAGGAGTTGGCCAAAAACCgtatccttctttaaatgcctttatggtttgttttagttgtcttcttttag ... tacaagagtttctatccttttatgctgttagccccttaattaaaatatagTGGCACAGAAATATGGAGGA