ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.1
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT



#2
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.2
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT



#3
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.4
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT



#4
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.5
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT



#5
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.6
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT



#6
gene: LOC_Os03g01750, transcript: LOC_Os03g01750.7
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  PP1S144_24V6  PP1S14_180V6  Vv00s0250g00020  GRMZM2G052546  
CAGCAAGATCCAGACCTTGAgtatccctattattgatttttttttctcatcatgcttataaaaagaaagg ... ccaatgtgttctttcagtgaatagttgtattccatccttaaccagttcagATATTTTGGAGTTGACATCT