ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os02g33430, transcript: LOC_Os02g33430.1
Orthologs: AT5G22220  AT2G36010  GLYMA10G09410  GLYMA02G35850  PP1S22_60V6  PP1S38_356V6  SELMODRAFT_136738  SELMODRAFT_137588  Vv08s0007g02510  Vv06s0080g01110  GRMZM2G041701  
TGATATGTGGAAAACAGCACgtatcctttatgatcgttcattacacttttgtttggactattcatagttt ... aacttataagtagctactgttgcaacttgaagtacttaacatggaaacagCAGATGTGCAGTGGGATGAG



#2
gene: LOC_Os02g33430, transcript: LOC_Os02g33430.2
Orthologs: AT5G22220  AT2G36010  GLYMA10G09410  GLYMA02G35850  PP1S22_60V6  PP1S38_356V6  SELMODRAFT_136738  SELMODRAFT_137588  Vv08s0007g02510  Vv06s0080g01110  GRMZM2G041701  
TGATATGTGGAAAACAGCACgtatcctttatgatcgttcattacacttttgtttggactattcatagttt ... aacttataagtagctactgttgcaacttgaagtacttaacatggaaacagCAGATGTGCAGTGGGATGAG