ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os01g39810, transcript: LOC_Os01g39810.1
Orthologs: AT5G14850 GLYMA13G01500 PP1S32_143V6 Vv11s0037g01100 GRMZM2G000937 GRMZM2G164175
ATCACGTTGCCCAGTGGGCAgtatccttgaactcatttatgtagatatgatgttcctttttcgtaaataaacaagtccattttcctggtgaatggtgaccttaacaagtcatttccagCTATTTTCACAGCTTGTTAA

#2
gene: LOC_Os01g39810, transcript: LOC_Os01g39810.2
Orthologs: AT5G14850 GLYMA13G01500 PP1S32_143V6 Vv11s0037g01100 GRMZM2G000937 GRMZM2G164175
ATCACGTTGCCCAGTGGGCAgtatccttgaactcatttatgtagatatgatgttcctttttcgtaaataaacaagtccattttcctggtgaatggtgaccttaacaagtcatttccagCTATTTTCACAGCTTGTTAA

#3
gene: LOC_Os01g39810, transcript: LOC_Os01g39810.3
Orthologs: AT5G14850 GLYMA13G01500 PP1S32_143V6 Vv11s0037g01100 GRMZM2G000937 GRMZM2G164175
ATCACGTTGCCCAGTGGGCAgtatccttgaactcatttatgtagatatgatgttcctttttcgtaaataaacaagtccattttcctggtgaatggtgaccttaacaagtcatttccagCTATTTTCACAGCTTGTTAA