ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.1
Orthologs: AT3G16230 AT3G16220 PP1S106_148V6 SELMODRAFT_135207 SELMODRAFT_88393 GRMZM2G093104
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT

#2
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.2
Orthologs: AT3G16230 AT3G16220 PP1S106_148V6 SELMODRAFT_135207 SELMODRAFT_88393 GRMZM2G093104
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT

#3
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.3
Orthologs: AT3G16230 AT3G16220 PP1S106_148V6 SELMODRAFT_135207 SELMODRAFT_88393 GRMZM2G093104
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT

#4
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.4
Orthologs: AT3G16230 AT3G16220 PP1S106_148V6 SELMODRAFT_135207 SELMODRAFT_88393 GRMZM2G093104
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT