ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.1
Orthologs: AT3G16230  AT3G16220  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT



#2
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.2
Orthologs: AT3G16230  AT3G16220  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT



#3
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.3
Orthologs: AT3G16230  AT3G16220  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT



#4
gene: LOC_Os01g13090, transcript: LOC_Os01g13090.4
Orthologs: AT3G16230  AT3G16220  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
ACGCCTACAACAAGTTTGCGgtatcctttgaacttctaacaaacattcttggggacatatgatgtgaaaa ... aatcttttttatgcaaaatgttgttccttcacttccttttacttaatcagACATTATAATTGATGCCTTT