ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM5G840013, transcript: GRMZM5G840013_T01
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  LOC_Os05g28980  
AACATGGAAGTTATTTCAAGatatccttttttaactatgctgccgttgctgatcatttgcatttttacat ... ggtatgttggaacacagaatttacacattgttttccttaatgaataatacATGCAACGCAGGCGCAGAGT



#2
gene: GRMZM5G840013, transcript: GRMZM5G840013_T02
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  LOC_Os05g28980  
AACATGGAAGTTATTTCAAGatatccttttttaactatgctgccgttgctgatcatttgcatttttacat ... ggtatgttggaacacagaatttacacattgttttccttaatgaataatacATGCAACGCAGGCGCAGAGT



#3
gene: GRMZM5G840013, transcript: GRMZM5G840013_T03
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  LOC_Os05g28980  
AACATGGAAGTTATTTCAAGatatccttttttaactatgctgccgttgctgatcatttgcatttttacat ... ggtatgttggaacacagaatttacacattgttttccttaatgaataatacATGCAACGCAGGCGCAGAGT