ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM5G811797, transcript: GRMZM5G811797_T01
Orthologs: AT1G49300 GLYMA12G04830 GLYMA11G12630 LOC_Os05g44050 SELMODRAFT_228214 SELMODRAFT_228953 Vv03s0063g02420
AAGACGTCTTTGATGAACCAgtatcctgcgattcagatcgattcttgacaagctgacttgatttcgtttc ... ttggttggttggtttgggttgtgttttctttgagctgtgatgtaattcagATATGTGAACAAGAAGTTCA

#2
gene: GRMZM5G811797, transcript: GRMZM5G811797_T02
Orthologs: AT1G49300 GLYMA12G04830 GLYMA11G12630 LOC_Os05g44050 SELMODRAFT_228214 SELMODRAFT_228953 Vv03s0063g02420
AAGACGTCTTTGATGAACCAgtatcctgcgattcagatcgattcttgacaagctgacttgatttcgtttc ... ttggttggttggtttgggttgtgttttctttgagctgtgatgtaattcagATATGTGAACAAGAAGTTCA

#3
gene: GRMZM5G811797, transcript: GRMZM5G811797_T04
Orthologs: AT1G49300 GLYMA12G04830 GLYMA11G12630 LOC_Os05g44050 SELMODRAFT_228214 SELMODRAFT_228953 Vv03s0063g02420
AAGACGTCTTTGATGAACCAgtatcctgcgattcagatcgattcttgacaagctgacttgatttcgtttc ... ttggttggttggtttgggttgtgttttctttgagctgtgatgtaattcagATATGTGAACAAGAAGTTCA

#4
gene: GRMZM5G811797, transcript: GRMZM5G811797_T05
Orthologs: AT1G49300 GLYMA12G04830 GLYMA11G12630 LOC_Os05g44050 SELMODRAFT_228214 SELMODRAFT_228953 Vv03s0063g02420
AAGACGTCTTTGATGAACCAgtatcctgcgattcagatcgattcttgacaagctgacttgatttcgtttc ... ttggttggttggtttgggttgtgttttctttgagctgtgatgtaattcagATATGTGAACAAGAAGTTCA