ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G453424, transcript: GRMZM2G453424_T03
Orthologs: AT4G15950 GLYMA15G12830 GLYMA09G01880 LOC_Os02g49150 Vv00s0194g00020
TCTGTGAAACAAGCCATTGAgtatcctaatcatttttttttacaatagatatattagaactcgcatctta ... gagttatactattttacttaccagtacagttccttaactggttgctgcagACCTCTTAAAAAATGTGGGG

#2
gene: GRMZM2G453424, transcript: GRMZM2G453424_T04
Orthologs: AT4G15950 GLYMA15G12830 GLYMA09G01880 LOC_Os02g49150 Vv00s0194g00020
TCTGTGAAACAAGCCATTGAgtatcctaatcatttttttttacaatagatatattagaactcgcatctta ... gagttatactattttacttaccagtacagttccttaactggttgctgcagACCTCTTAAAAAATGTGGGG

#3
gene: GRMZM2G453424, transcript: GRMZM2G453424_T05
Orthologs: AT4G15950 GLYMA15G12830 GLYMA09G01880 LOC_Os02g49150 Vv00s0194g00020
TCTGTGAAACAAGCCATTGAgtatcctaatcatttttttttacaatagatatattagaactcgcatctta ... gagttatactattttacttaccagtacagttccttaactggttgctgcagACCTCTTAAAAAATGTGGGG

#4
gene: GRMZM2G453424, transcript: GRMZM2G453424_T06
Orthologs: AT4G15950 GLYMA15G12830 GLYMA09G01880 LOC_Os02g49150 Vv00s0194g00020
TCTGTGAAACAAGCCATTGAgtatcctaatcatttttttttacaatagatatattagaactcgcatctta ... gagttatactattttacttaccagtacagttccttaactggttgctgcagACCTCTTAAAAAATGTGGGG

#5
gene: GRMZM2G453424, transcript: GRMZM2G453424_T07
Orthologs: AT4G15950 GLYMA15G12830 GLYMA09G01880 LOC_Os02g49150 Vv00s0194g00020
TCTGTGAAACAAGCCATTGAgtatcctaatcatttttttttacaatagatatattagaactcgcatctta ... gagttatactattttacttaccagtacagttccttaactggttgctgcagACCTCTTAAAAAATGTGGGG