ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G406553, transcript: GRMZM2G406553_T01
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG



#2
gene: GRMZM2G406553, transcript: GRMZM2G406553_T02
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG



#3
gene: GRMZM2G406553, transcript: GRMZM2G406553_T03
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG



#4
gene: GRMZM2G406553, transcript: GRMZM2G406553_T04
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG



#5
gene: GRMZM2G406553, transcript: GRMZM2G406553_T05
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG



#6
gene: GRMZM2G406553, transcript: GRMZM2G406553_T06
Orthologs: AT5G08390  AT5G23430  GLYMA19G00890  GLYMA05G09360  LOC_Os04g58130  Vv10s0071g01150  
CAAGCGCGCCTACAAGCTCCgtatcctcgtcgattcgtttccgctgtttcgctaccttttttttgtggaa ... gggctgctaaatgtgccacattgcgatgccttgacttgcgattggtgtagAGGAGTTTGTGGCGCATGCG