ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G347717, transcript: GRMZM2G347717_T01
Orthologs: AT3G53520 GLYMA13G19640 GLYMA10G05260 LOC_Os03g17230 PP1S60_124V6 PP1S209_52V6 PP1S120_28V6
TCAACCCCATCAAAACCATCatatcctccccgctccgctgcccgcgcataattcgtccacatcctcacag ... tgtctgtttttttttttcttcaattgtttctttaaccaactatgtacaagACAAATGTCATGGGGACCTT

#2
gene: GRMZM2G347717, transcript: GRMZM2G347717_T02
Orthologs: AT3G53520 GLYMA13G19640 GLYMA10G05260 LOC_Os03g17230 PP1S60_124V6 PP1S209_52V6 PP1S120_28V6
TCAACCCCATCAAAACCATCatatcctccccgctccgctgcccgcgcataattcgtccacatcctcacag ... ttttgtctgtttttttttttcttcaattgtttctttaaccaactatgtacAAGACAAATGTCATGGGGAC

#3
gene: GRMZM2G347717, transcript: GRMZM2G347717_T03
Orthologs: AT3G53520 GLYMA13G19640 GLYMA10G05260 LOC_Os03g17230 PP1S60_124V6 PP1S209_52V6 PP1S120_28V6
TCAACCCCATCAAAACCATCatatcctccccgctccgctgcccgcgcataattcgtccacatcctcacag ... ttttgtctgtttttttttttcttcaattgtttctttaaccaactatgtacAAGACAAATGTCATGGGGAC