ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G312970, transcript: GRMZM2G312970_T01
Orthologs: AT3G48260 GLYMA04G36260 LOC_Os05g01780 Vv17s0000g09380
AAGGGCGCCTTCAAGACGGTgtatccttccattccccctgggcgtttgacgcctgggtctgattcggggc ... gcttcaatgctatccagttgggttccttgatttatattttattggcatagATACAAAGCTTTTGATCAAC

#2
gene: GRMZM2G312970, transcript: GRMZM2G312970_T02
Orthologs: AT3G48260 GLYMA04G36260 LOC_Os05g01780 Vv17s0000g09380
AAGGGCGCCTTCAAGACGGTgtatccttccattccccctgggcgtttgacgcctgggtctgattcggggc ... gcttcaatgctatccagttgggttccttgatttatattttattggcatagATACAAAGCTTTTGATCAAC

#3
gene: GRMZM2G312970, transcript: GRMZM2G312970_T04
Orthologs: AT3G48260 GLYMA04G36260 LOC_Os05g01780 Vv17s0000g09380
AAGGGCGCCTTCAAGACGGTgtatccttccattccccctgggcgtttgacgcctgggtctgattcggggc ... gcttcaatgctatccagttgggttccttgatttatattttattggcatagATACAAAGCTTTTGATCAAC

#4
gene: GRMZM2G312970, transcript: GRMZM2G312970_T05
Orthologs: AT3G48260 GLYMA04G36260 LOC_Os05g01780 Vv17s0000g09380
AAGGGCGCCTTCAAGACGGTgtatccttccattccccctgggcgtttgacgcctgggtctgattcggggc ... gcttcaatgctatccagttgggttccttgatttatattttattggcatagATACAAAGCTTTTGATCAAC