ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G312738, transcript: GRMZM2G312738_T01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TACTTCCCTTATTTGCCACTgtatcctcttcaggaggctgcttatgcatttctatatcacatcttctttctgttattttcttaacatattcaccagATATCACAGATGTTTGTTTG



#2
gene: GRMZM2G312738, transcript: GRMZM2G312738_T01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TACTGAGATTGGTGTGATCTgtatccaaaaatgttcaatcgaccctagattcagttacatgctttttttt ... gggagtggtactgctaatctgttaagtcactaaccttaacgatatcttagATAGGTCTGGATTAGAAACG



#3
gene: GRMZM2G312738, transcript: GRMZM2G312738_T01
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TGATTGCAAAGCAAGCTATTgtatccttcagtttttttattttatcttgtactacctttggtctctttta ... ttgttcctcacaggcatgctactgcattaagtttccttgacacttcccagTTATTGTATTATCTATTTGA



#4
gene: GRMZM2G312738, transcript: GRMZM2G312738_T02
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TACTTCCCTTATTTGCCACTgtatcctcttcaggaggctgcttatgcatttctatatcacatcttctttctgttattttcttaacatattcaccagATATCACAGATGTTTGTTTG



#5
gene: GRMZM2G312738, transcript: GRMZM2G312738_T02
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TACTGAGATTGGTGTGATCTgtatccaaaaatgttcaatcgaccctagattcagttacatgctttttttt ... gggagtggtactgctaatctgttaagtcactaaccttaacgatatcttagATAGGTCTGGATTAGAAACG



#6
gene: GRMZM2G312738, transcript: GRMZM2G312738_T02
Orthologs: AT2G39810  GLYMA11G03840  GLYMA01G41590  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  
TGATTGCAAAGCAAGCTATTgtatccttcagtttttttattttatcttgtactacctttggtctctttta ... ttgttcctcacaggcatgctactgcattaagtttccttgacacttcccagTTATTGTATTATCTATTTGA