ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G159032, transcript: GRMZM2G159032_T01
Orthologs: AT5G03740  AT5G22650  AT2G27840  GLYMA19G37540  GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  GLYMA03G34850  LOC_Os05g51830  
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG



#2
gene: GRMZM2G159032, transcript: GRMZM2G159032_T02
Orthologs: AT5G03740  AT5G22650  AT2G27840  GLYMA19G37540  GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  GLYMA03G34850  LOC_Os05g51830  
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG



#3
gene: GRMZM2G159032, transcript: GRMZM2G159032_T03
Orthologs: AT5G03740  AT5G22650  AT2G27840  GLYMA19G37540  GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  GLYMA03G34850  LOC_Os05g51830  
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG



#4
gene: GRMZM2G159032, transcript: GRMZM2G159032_T04
Orthologs: AT5G03740  AT5G22650  AT2G27840  GLYMA19G37540  GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  GLYMA03G34850  LOC_Os05g51830  
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG