ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G159032, transcript: GRMZM2G159032_T01
Orthologs: AT5G03740 AT5G22650 AT2G27840 GLYMA19G37540 GLYMA12G30600 GLYMA12G09000 GLYMA11G19480 GLYMA03G34850 LOC_Os05g51830
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG

#2
gene: GRMZM2G159032, transcript: GRMZM2G159032_T02
Orthologs: AT5G03740 AT5G22650 AT2G27840 GLYMA19G37540 GLYMA12G30600 GLYMA12G09000 GLYMA11G19480 GLYMA03G34850 LOC_Os05g51830
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG

#3
gene: GRMZM2G159032, transcript: GRMZM2G159032_T03
Orthologs: AT5G03740 AT5G22650 AT2G27840 GLYMA19G37540 GLYMA12G30600 GLYMA12G09000 GLYMA11G19480 GLYMA03G34850 LOC_Os05g51830
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG

#4
gene: GRMZM2G159032, transcript: GRMZM2G159032_T04
Orthologs: AT5G03740 AT5G22650 AT2G27840 GLYMA19G37540 GLYMA12G30600 GLYMA12G09000 GLYMA11G19480 GLYMA03G34850 LOC_Os05g51830
CAGCCATTCGAGGAAGATGAatatccttttttagcattgaattagctctatttccagtagaagtgatcggatttttttgtttccttgacctcttgtttgccttcttccacAATGGATCTTGATTCTGAAG