ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G158162, transcript: GRMZM2G158162_T01
Orthologs: AT2G30470 GLYMA18G05840 GLYMA02G40280 LOC_Os07g48200 PP1S42_132V6 PP1S31_242V6 Vv08s0058g01300
CTGCAACAAATATCTGGAGAgtatccttgataaggtctccatacatttgaaactgtgaacttcctggtga ... gtgtaacagatatagtttttcttttatcttccttgactatattttgcaagTTCAAATTCCACAATCGTTC

#2
gene: GRMZM2G158162, transcript: GRMZM2G158162_T02
Orthologs: AT2G30470 GLYMA18G05840 GLYMA02G40280 LOC_Os07g48200 PP1S42_132V6 PP1S31_242V6 Vv08s0058g01300
CTGCAACAAATATCTGGAGAgtatccttgataaggtctccatacatttgaaactgtgaacttcctggtga ... gtgtaacagatatagtttttcttttatcttccttgactatattttgcaagTTCAAATTCCACAATCGTTC

#3
gene: GRMZM2G158162, transcript: GRMZM2G158162_T03
Orthologs: AT2G30470 GLYMA18G05840 GLYMA02G40280 LOC_Os07g48200 PP1S42_132V6 PP1S31_242V6 Vv08s0058g01300
CTGCAACAAATATCTGGAGAgtatccttgataaggtctccatacatttgaaactgtgaacttcctggtga ... gtgtaacagatatagtttttcttttatcttccttgactatattttgcaagTTCAAATTCCACAATCGTTC