ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G157836, transcript: GRMZM2G157836_T01
Orthologs: AT5G55130 Vv19s0090g01020
GCTTTGGAGATTGCACGGAAgtatccttacaatatatgctatgacagacacaatattgtttcctcaaagccaacactcttgttttcagcattaactaaaataacctcagATATGATATAGTTGTTGATG

#2
gene: GRMZM2G157836, transcript: GRMZM2G157836_T05
Orthologs: AT5G55130 Vv19s0090g01020
GCTTTGGAGATTGCACGGAAgtatccttacaatatatgctatgacagacacaatattgtttcctcaaagccaacactcttgttttcagcattaactaaaataacctcagATATGATATAGTTGTTGATG

#3
gene: GRMZM2G157836, transcript: GRMZM2G157836_T07
Orthologs: AT5G55130 Vv19s0090g01020
GCTTTGGAGATTGCACGGAAgtatccttacaatatatgctatgacagacacaatattgtttcctcaaagccaacactcttgttttcagcattaactaaaataacctcagATATGATATAGTTGTTGATG

#4
gene: GRMZM2G157836, transcript: GRMZM2G157836_T08
Orthologs: AT5G55130 Vv19s0090g01020
GCTTTGGAGATTGCACGGAAgtatccttacaatatatgctatgacagacacaatattgtttcctcaaagccaacactcttgttttcagcattaactaaaataacctcagATATGATATAGTTGTTGATG

#5
gene: GRMZM2G157836, transcript: GRMZM2G157836_T09
Orthologs: AT5G55130 Vv19s0090g01020
GCTTTGGAGATTGCACGGAAgtatccttacaatatatgctatgacagacacaatattgtttcctcaaagccaacactcttgttttcagcattaactaaaataacctcagATATGATATAGTTGTTGATG