ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G157621, transcript: GRMZM2G157621_T01
Orthologs: AT1G02890 AT4G02480 AT1G62130 GLYMA10G02410 GLYMA10G02400 GLYMA06G17940 GLYMA02G17410 GLYMA02G17400 LOC_Os07g47530 Vv07s0005g00200 Vv17s0000g01550
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA

#2
gene: GRMZM2G157621, transcript: GRMZM2G157621_T02
Orthologs: AT1G02890 AT4G02480 AT1G62130 GLYMA10G02410 GLYMA10G02400 GLYMA06G17940 GLYMA02G17410 GLYMA02G17400 LOC_Os07g47530 Vv07s0005g00200 Vv17s0000g01550
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA

#3
gene: GRMZM2G157621, transcript: GRMZM2G157621_T03
Orthologs: AT1G02890 AT4G02480 AT1G62130 GLYMA10G02410 GLYMA10G02400 GLYMA06G17940 GLYMA02G17410 GLYMA02G17400 LOC_Os07g47530 Vv07s0005g00200 Vv17s0000g01550
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA