ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G157621, transcript: GRMZM2G157621_T01
Orthologs: AT1G02890  AT4G02480  AT1G62130  GLYMA10G02410  GLYMA10G02400  GLYMA06G17940  GLYMA02G17410  GLYMA02G17400  LOC_Os07g47530  Vv07s0005g00200  Vv17s0000g01550  
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA



#2
gene: GRMZM2G157621, transcript: GRMZM2G157621_T02
Orthologs: AT1G02890  AT4G02480  AT1G62130  GLYMA10G02410  GLYMA10G02400  GLYMA06G17940  GLYMA02G17410  GLYMA02G17400  LOC_Os07g47530  Vv07s0005g00200  Vv17s0000g01550  
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA



#3
gene: GRMZM2G157621, transcript: GRMZM2G157621_T03
Orthologs: AT1G02890  AT4G02480  AT1G62130  GLYMA10G02410  GLYMA10G02400  GLYMA06G17940  GLYMA02G17410  GLYMA02G17400  LOC_Os07g47530  Vv07s0005g00200  Vv17s0000g01550  
CTCTTGGGACACATGCTTATgtatcctttcctaccaccagctactttcttctgtgcttctctgaaatcta ... atggcatacaagcatccatttggatacgaaattccttaatgtgctggcagATATTTCAGCAACTTCTAGA