ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name
atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.


#1
gene: GRMZM2G147534, transcript: GRMZM2G147534_T01
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... caaaaaaacatttgttggcctttgtaaaccattaacccgcagacattcagAAGAACATATCCATCAATGC



#2
gene: GRMZM2G147534, transcript: GRMZM2G147534_T02
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#3
gene: GRMZM2G147534, transcript: GRMZM2G147534_T03
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#4
gene: GRMZM2G147534, transcript: GRMZM2G147534_T04
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#5
gene: GRMZM2G147534, transcript: GRMZM2G147534_T05
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... caaaaaaacatttgttggcctttgtaaaccattaacccgcagacattcagAAGAACATATCCATCAATGC



#6
gene: GRMZM2G147534, transcript: GRMZM2G147534_T06
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... caaaaaaacatttgttggcctttgtaaaccattaacccgcagacattcagAAGAACATATCCATCAATGC



#7
gene: GRMZM2G147534, transcript: GRMZM2G147534_T07
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#8
gene: GRMZM2G147534, transcript: GRMZM2G147534_T08
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#9
gene: GRMZM2G147534, transcript: GRMZM2G147534_T09
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... tcttatttcaaaaaaacatttgttggcctttgtaaaccattaacccgcagACATTCAGAAGAACATATCC



#10
gene: GRMZM2G147534, transcript: GRMZM2G147534_T10
Orthologs: AT4G35987  GLYMA02G05310  LOC_Os03g14020  SELMODRAFT_112177  SELMODRAFT_78185  Vv04s0023g03560  
CAACCCACAAGTAGCTGAGTgtatccttcttaatataatgtatgcacaatggagaatggagtttttgcca ... caaaaaaacatttgttggcctttgtaaaccattaacccgcagacattcagAAGAACATATCCATCAATGC