ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G145175, transcript: GRMZM2G145175_T01
Orthologs: AT4G20410 GLYMA15G21990 GLYMA09G09940 LOC_Os04g52760 PP1S506_3V6 SELMODRAFT_118760 SELMODRAFT_131905 Vv10s0092g00120
GGACAGGAAATGATCTCCTCgtatcctttagaaatttctctgcagttttggtattttcatttttcatattattatacattaccgtattgtacccttagctaatgccatagACCATGGGACGCTGCTAAGC

#2
gene: GRMZM2G145175, transcript: GRMZM2G145175_T02
Orthologs: AT4G20410 GLYMA15G21990 GLYMA09G09940 LOC_Os04g52760 PP1S506_3V6 SELMODRAFT_118760 SELMODRAFT_131905 Vv10s0092g00120
GGACAGGAAATGATCTCCTCgtatcctttagaaatttctctgcagttttggtattttcatttttcatattattatacattaccgtattgtacccttagctaatgccatagACCATGGGACGCTGCTAAGC

#3
gene: GRMZM2G145175, transcript: GRMZM2G145175_T05
Orthologs: AT4G20410 GLYMA15G21990 GLYMA09G09940 LOC_Os04g52760 PP1S506_3V6 SELMODRAFT_118760 SELMODRAFT_131905 Vv10s0092g00120
GGACAGGAAATGATCTCCTCgtatcctttagaaatttctctgcagttttggtattttcatttttcatattattatacattaccgtattgtacccttagctaatgccatagACCATGGGACGCTGCTAAGC

#4
gene: GRMZM2G145175, transcript: GRMZM2G145175_T06
Orthologs: AT4G20410 GLYMA15G21990 GLYMA09G09940 LOC_Os04g52760 PP1S506_3V6 SELMODRAFT_118760 SELMODRAFT_131905 Vv10s0092g00120
GGACAGGAAATGATCTCCTCgtatcctttagaaatttctctgcagttttggtattttcatttttcatattattatacattaccgtattgtacccttagctaatgccatagACCATGGGACGCTGCTAAGC