ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G124557, transcript: GRMZM2G124557_T01
Orthologs: AT5G12210 AT3G12070 GLYMA08G11710 GLYMA05G28630 LOC_Os08g40140 PP1S34_430V6 PP1S163_87V6 SELMODRAFT_269919 SELMODRAFT_145221 Vv15s0024g00080 Vv12s0134g00150
CGTCGACAAGGTTGCTGATTgtatccttttttcccagattttgaattgggtttgtgctgttggtgtatgt ... gctcactgaacttggaatccagttcctcttccttatctaaatcacgccagATGTCGCCGGACTGCAAAAC

#2
gene: GRMZM2G124557, transcript: GRMZM2G124557_T02
Orthologs: AT5G12210 AT3G12070 GLYMA08G11710 GLYMA05G28630 LOC_Os08g40140 PP1S34_430V6 PP1S163_87V6 SELMODRAFT_269919 SELMODRAFT_145221 Vv15s0024g00080 Vv12s0134g00150
CGTCGACAAGGTTGCTGATTgtatccttttttcccagattttgaattgggtttgtgctgttggtgtatgt ... gctcactgaacttggaatccagttcctcttccttatctaaatcacgccagATGTCGCCGGACTGCAAAAC

#3
gene: GRMZM2G124557, transcript: GRMZM2G124557_T03
Orthologs: AT5G12210 AT3G12070 GLYMA08G11710 GLYMA05G28630 LOC_Os08g40140 PP1S34_430V6 PP1S163_87V6 SELMODRAFT_269919 SELMODRAFT_145221 Vv15s0024g00080 Vv12s0134g00150
CGTCGACAAGGTTGCTGATTgtatccttttttcccagattttgaattgggtttgtgctgttggtgtatgt ... gctcactgaacttggaatccagttcctcttccttatctaaatcacgccagATGTCGCCGGACTGCAAAAC