ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G121176, transcript: GRMZM2G121176_T01
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  LOC_Os03g58480  Vv14s0081g00480  Vv05s0020g04880  
TCTTGTTCTGTGACATCCTCatatcctttttctgtgtgctattgttgagcatctcgtcatcctctttttt ... acaagcattctgagttgcatgtggcccttttcctgagctatgtaaagaacTACAACATCAACAAGAGCTG



#2
gene: GRMZM2G121176, transcript: GRMZM2G121176_T03
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  LOC_Os03g58480  Vv14s0081g00480  Vv05s0020g04880  
TCTTGTTCTGTGACATCCTCatatcctttttctgtgtgctattgttgagcatctcgtcatcctctttttt ... agcattctgagttgcatgtggcccttttcctgagctatgtaaagaactacAACATCAACAAGAGCTGGCA



#3
gene: GRMZM2G121176, transcript: GRMZM2G121176_T04
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  LOC_Os03g58480  Vv14s0081g00480  Vv05s0020g04880  
TCTTGTTCTGTGACATCCTCatatcctttttctgtgtgctattgttgagcatctcgtcatcctctttttt ... agcattctgagttgcatgtggcccttttcctgagctatgtaaagaactacAACATCAACAAGAGCTGGCA