ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G118014, transcript: GRMZM2G118014_T01
Orthologs: AT3G03340  AT5G17440  GLYMA18G47910  GLYMA09G38430  LOC_Os03g62640  PP1S88_36V6  PP1S402_41V6  Vv04s0023g00800  
TCGCTTCAACTGCGGAAAGAgtatccttcattttacctcattatctttgtttttccttctcttaattgtt ... atttcttgtgcaaaatactgtatacacatgttttcctgagctattggtagTTATGAAGAAGCGAAAGCAA



#2
gene: GRMZM2G118014, transcript: GRMZM2G118014_T02
Orthologs: AT3G03340  AT5G17440  GLYMA18G47910  GLYMA09G38430  LOC_Os03g62640  PP1S88_36V6  PP1S402_41V6  Vv04s0023g00800  
TCGCTTCAACTGCGGAAAGAgtatccttcattttacctcattatctttgtttttccttctcttaattgtt ... atttcttgtgcaaaatactgtatacacatgttttcctgagctattggtagTTATGAAGAAGCGAAAGCAA



#3
gene: GRMZM2G118014, transcript: GRMZM2G118014_T04
Orthologs: AT3G03340  AT5G17440  GLYMA18G47910  GLYMA09G38430  LOC_Os03g62640  PP1S88_36V6  PP1S402_41V6  Vv04s0023g00800  
TCGCTTCAACTGCGGAAAGAgtatccttcattttacctcattatctttgtttttccttctcttaattgtt ... atttcttgtgcaaaatactgtatacacatgttttcctgagctattggtagTTATGAAGAAGCGAAAGCAA



#4
gene: GRMZM2G118014, transcript: GRMZM2G118014_T05
Orthologs: AT3G03340  AT5G17440  GLYMA18G47910  GLYMA09G38430  LOC_Os03g62640  PP1S88_36V6  PP1S402_41V6  Vv04s0023g00800  
TCGCTTCAACTGCGGAAAGAgtatccttcattttacctcattatctttgtttttccttctcttaattgtt ... atttcttgtgcaaaatactgtatacacatgttttcctgagctattggtagTTATGAAGAAGCGAAAGCAA



#5
gene: GRMZM2G118014, transcript: GRMZM2G118014_T06
Orthologs: AT3G03340  AT5G17440  GLYMA18G47910  GLYMA09G38430  LOC_Os03g62640  PP1S88_36V6  PP1S402_41V6  Vv04s0023g00800  
TCGCTTCAACTGCGGAAAGAgtatccttcattttacctcattatctttgtttttccttctcttaattgtt ... tgcaaaatactgtatacacatgttttcctgagctattggtagttatgaagAAGCGAAAGCAAAGGGAACA