ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G115390, transcript: GRMZM2G115390_T01
Orthologs: AT5G38380 GLYMA13G07640 LOC_Os07g18250 PP1S252_12V6
AAGAACACATTCTCCTTTATgtatcctactacatagatatcttcctgaaatgatttactgagttattgtg ... ttgtaatggacccatctaaacatgttttggaagaccttaacttcatacagATAGCTTTGGAAGTGAACCA

#2
gene: GRMZM2G115390, transcript: GRMZM2G115390_T02
Orthologs: AT5G38380 GLYMA13G07640 LOC_Os07g18250 PP1S252_12V6
AAGAACACATTCTCCTTTATgtatcctactacatagatatcttcctgaaatgatttactgagttattgtg ... ttgtaatggacccatctaaacatgttttggaagaccttaacttcatacagATAGCTTTGGAAGTGAACCA

#3
gene: GRMZM2G115390, transcript: GRMZM2G115390_T03
Orthologs: AT5G38380 GLYMA13G07640 LOC_Os07g18250 PP1S252_12V6
AAGAACACATTCTCCTTTATgtatcctactacatagatatcttcctgaaatgatttactgagttattgtg ... ttgtaatggacccatctaaacatgttttggaagaccttaacttcatacagATAGCTTTGGAAGTGAACCA

#4
gene: GRMZM2G115390, transcript: GRMZM2G115390_T04
Orthologs: AT5G38380 GLYMA13G07640 LOC_Os07g18250 PP1S252_12V6
AAGAACACATTCTCCTTTATgtatcctactacatagatatcttcctgaaatgatttactgagttattgtg ... ttgtaatggacccatctaaacatgttttggaagaccttaacttcatacagATAGCTTTGGAAGTGAACCA

#5
gene: GRMZM2G115390, transcript: GRMZM2G115390_T05
Orthologs: AT5G38380 GLYMA13G07640 LOC_Os07g18250 PP1S252_12V6
AAGAACACATTCTCCTTTATgtatcctactacatagatatcttcctgaaatgatttactgagttattgtg ... ttgtaatggacccatctaaacatgttttggaagaccttaacttcatacagATAGCTTTGGAAGTGAACCA