ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G097170, transcript: GRMZM2G097170_T01
Orthologs: AT4G23330  Vv02s0025g03460  
GAAAGCTTAGCTATGCAACTgtatccttttgttcgctgctgacaaaattagttctattatattctgtgga ... tgaacactgttcatttcggagctacttgttgaatcttaatattttgaaagGAAGATTCTACGGAAGAATG



#2
gene: GRMZM2G097170, transcript: GRMZM2G097170_T02
Orthologs: AT4G23330  Vv02s0025g03460  
GAAAGCTTAGCTATGCAACTgtatccttttgttcgctgctgacaaaattagttctattatattctgtgga ... tgaacactgttcatttcggagctacttgttgaatcttaatattttgaaagGAAGATTCTACGGAAGAATG



#3
gene: GRMZM2G097170, transcript: GRMZM2G097170_T03
Orthologs: AT4G23330  Vv02s0025g03460  
GAAAGCTTAGCTATGCAACTgtatccttttgttcgctgctgacaaaattagttctattatattctgtgga ... cactgttcatttcggagctacttgttgaatcttaatattttgaaaggaagATTCTACGGAAGAATGTTGA