ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G095194, transcript: GRMZM2G095194_T01
Orthologs: AT1G73180 GLYMA07G33000 GLYMA02G15500 LOC_Os02g39350 PP1S195_98V6 SELMODRAFT_104015 SELMODRAFT_149237 Vv05s0094g00460
ATTTGCTGTGGTTTATGGTGgtatccttacatttactgtcttcatatgcaatgtagaatttcagtgttta ... cttttacgtaccatttgtccttttttaagtgctccttaactgtatctcagTTATGCCGCCCAAGGCAACA

#2
gene: GRMZM2G095194, transcript: GRMZM2G095194_T01
Orthologs: AT1G73180 GLYMA07G33000 GLYMA02G15500 LOC_Os02g39350 PP1S195_98V6 SELMODRAFT_104015 SELMODRAFT_149237 Vv05s0094g00460
ATGGAACCCCAAAGGACGATgtatcctctagaataatttgatcattcagtcttgatgtgtgatcttgtgt ... tacgaaacattttgctttaacaatatccttgaccacattttctcgaccagTTGTTGTATTAGCAGGTTTT

#3
gene: GRMZM2G095194, transcript: GRMZM2G095194_T02
Orthologs: AT1G73180 GLYMA07G33000 GLYMA02G15500 LOC_Os02g39350 PP1S195_98V6 SELMODRAFT_104015 SELMODRAFT_149237 Vv05s0094g00460
ATTTGCTGTGGTTTATGGTGgtatccttacatttactgtcttcatatgcaatgtagaatttcagtgttta ... cttttacgtaccatttgtccttttttaagtgctccttaactgtatctcagTTATGCCGCCCAAGGCAACA